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Fast search of third-order epistatic interactions on CPU and GPU clusters.

, , and . Int. J. High Perform. Comput. Appl., (2020)

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UPCBLAS: a library for parallel matrix computations in Unified Parallel C., , , , , , and . Concurr. Comput. Pract. Exp., 24 (14): 1645-1667 (2012)Toxo: a library for calculating penetrance tables of high-order epistasis models., , , and . BMC Bioinform., 21 (1): 138 (2020)ParRADMeth: Identification of Differentially Methylated Regions on Multicore Clusters., , and . IEEE ACM Trans. Comput. Biol. Bioinform., 20 (3): 2041-2049 (2023)Evaluation of Existing Methods for High-Order Epistasis Detection., , , and . IEEE ACM Trans. Comput. Biol. Bioinform., 19 (2): 912-926 (2022)Large-scale genome-wide association studies on a GPU cluster using a CUDA-accelerated PGAS programming model., , , and . Int. J. High Perform. Comput. Appl., 29 (4): 506-510 (2015)Fiuncho: a program for any-order epistasis detection in CPU clusters., , and . CoRR, (2022)Fast search of third-order epistatic interactions on CPU and GPU clusters., , and . Int. J. High Perform. Comput. Appl., (2020)Parallel construction of RNA databases for extensive lncRNA-RNA interaction prediction., , and . SAC, page 555-558. ACM, (2023)UPC++ for bioinformatics: A case study using genome-wide association studies., , , and . CLUSTER, page 248-256. IEEE Computer Society, (2014)Analyzing the Energy Efficiency of the Memory Subsystem in Multicore Processors., , , and . ISPA, page 10-17. IEEE Computer Society, (2014)