Article,

CIG-P: Circular Interaction Graph for Proteomics

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BMC Bioinformatics, 15 (1): 1--5 (2014)
DOI: 10.1186/1471-2105-15-344

Abstract

A typical affinity purification coupled to mass spectrometry (AP-MS) experiment includes the purification of a target protein (bait) using an antibody and subsequent mass spectrometry analysis of all proteins co-purifying with the bait (aka prey proteins). Like any other systems biology approach, AP-MS experiments generate a lot of data and visualization has been challenging, especially when integrating AP-MS experiments with orthogonal datasets.

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