%0 Journal Article %1 Audenaert2011CyClus3D %A Audenaert, Pieter %A Van Parys, Thomas %A Brondel, Florian %A Pickavet, Mario %A Demeester, Piet %A Van de Peer, Yves %A Michoel, Tom %D 2011 %J Bioinformatics (Oxford, England) %K clustering cytoscape motifs networks plugin software %N 11 %P 1587--1588 %R 10.1093/bioinformatics/btr182 %T CyClus3D: a Cytoscape plugin for clustering network motifs in integrated networks. %U http://dx.doi.org/10.1093/bioinformatics/btr182 %V 27 %X SUMMARY: Network motifs in integrated molecular networks represent functional relationships between distinct data types. They aggregate to form dense topological structures corresponding to functional modules which cannot be detected by traditional graph clustering algorithms. We developed CyClus3D, a Cytoscape plugin for clustering composite three-node network motifs using a 3D spectral clustering algorithm. AVAILABILITY: Via the Cytoscape plugin manager or http://bioinformatics.psb.ugent.be/software/details/CyClus3D.

@article{Audenaert2011CyClus3D, abstract = {{SUMMARY}: Network motifs in integrated molecular networks represent functional relationships between distinct data types. They aggregate to form dense topological structures corresponding to functional modules which cannot be detected by traditional graph clustering algorithms. We developed {CyClus3D}, a Cytoscape plugin for clustering composite three-node network motifs using a {3D} spectral clustering algorithm. {AVAILABILITY}: Via the Cytoscape plugin manager or {http://bioinformatics.psb.ugent.be/software/details/CyClus3D}.}, added-at = {2018-12-02T16:09:07.000+0100}, author = {Audenaert, Pieter and Van Parys, Thomas and Brondel, Florian and Pickavet, Mario and Demeester, Piet and Van de Peer, Yves and Michoel, Tom}, biburl = {https://www.bibsonomy.org/bibtex/2f2f1b8ffcd6ea311fe0f5b275e774e0f/karthikraman}, citeulike-article-id = {9123485}, citeulike-linkout-0 = {http://dx.doi.org/10.1093/bioinformatics/btr182}, citeulike-linkout-1 = {http://bioinformatics.oxfordjournals.org/content/early/2011/04/08/bioinformatics.btr182.abstract}, citeulike-linkout-2 = {http://bioinformatics.oxfordjournals.org/content/early/2011/04/08/bioinformatics.btr182.full.pdf}, citeulike-linkout-3 = {http://view.ncbi.nlm.nih.gov/pubmed/21478195}, citeulike-linkout-4 = {http://www.hubmed.org/display.cgi?uids=21478195}, day = 1, doi = {10.1093/bioinformatics/btr182}, interhash = {166e2c71daeb9d4fcc2aa197f2e3bc3d}, intrahash = {f2f1b8ffcd6ea311fe0f5b275e774e0f}, issn = {1367-4811}, journal = {Bioinformatics (Oxford, England)}, keywords = {clustering cytoscape motifs networks plugin software}, month = jun, number = 11, pages = {1587--1588}, pmid = {21478195}, posted-at = {2011-04-29 09:28:54}, priority = {2}, timestamp = {2018-12-02T16:09:07.000+0100}, title = {{CyClus3D}: a Cytoscape plugin for clustering network motifs in integrated networks.}, url = {http://dx.doi.org/10.1093/bioinformatics/btr182}, volume = 27, year = 2011 }