Summary: CytoSEED is a Cytoscape plugin for viewing, manipulating and analyzing metabolic models created using the Model SEED. The CytoSEED plugin enables users of the Model SEED to create informative visualizations of the reaction networks generated for their organisms of interest. These visualizations are useful for understanding organism-specific biochemistry and for highlighting the results of flux variability analysis experiments.
%0 Journal Article
%1 DeJongh2012CytoSEED
%A DeJongh, Matthew
%A Bockstege, Benjamin
%A Frybarger, Paul
%A Hazekamp, Nicholas
%A Kammeraad, Joshua
%A McGeehan, Travis
%D 2012
%I Oxford University Press
%J Bioinformatics
%K cytoscape plugin
%N 6
%P 891--892
%R 10.1093/bioinformatics/btr719
%T CytoSEED: a Cytoscape plugin for viewing, manipulating and analyzing metabolic models created by the Model SEED
%U http://dx.doi.org/10.1093/bioinformatics/btr719
%V 28
%X Summary: CytoSEED is a Cytoscape plugin for viewing, manipulating and analyzing metabolic models created using the Model SEED. The CytoSEED plugin enables users of the Model SEED to create informative visualizations of the reaction networks generated for their organisms of interest. These visualizations are useful for understanding organism-specific biochemistry and for highlighting the results of flux variability analysis experiments.
@article{DeJongh2012CytoSEED,
abstract = {Summary: {CytoSEED} is a Cytoscape plugin for viewing, manipulating and analyzing metabolic models created using the Model {SEED}. The {CytoSEED} plugin enables users of the Model {SEED} to create informative visualizations of the reaction networks generated for their organisms of interest. These visualizations are useful for understanding organism-specific biochemistry and for highlighting the results of flux variability analysis experiments.},
added-at = {2018-12-02T16:09:07.000+0100},
author = {DeJongh, Matthew and Bockstege, Benjamin and Frybarger, Paul and Hazekamp, Nicholas and Kammeraad, Joshua and McGeehan, Travis},
biburl = {https://www.bibsonomy.org/bibtex/2c69d68bc8b8d36e551a24aa08bb4ce82/karthikraman},
citeulike-article-id = {10512344},
citeulike-linkout-0 = {http://dx.doi.org/10.1093/bioinformatics/btr719},
citeulike-linkout-1 = {http://bioinformatics.oxfordjournals.org/content/28/6/891.abstract},
citeulike-linkout-2 = {http://bioinformatics.oxfordjournals.org/content/28/6/891.full.pdf},
citeulike-linkout-3 = {http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3307106/},
citeulike-linkout-4 = {http://view.ncbi.nlm.nih.gov/pubmed/22210867},
citeulike-linkout-5 = {http://www.hubmed.org/display.cgi?uids=22210867},
day = 15,
doi = {10.1093/bioinformatics/btr719},
interhash = {a1846779343f3984202bde8849c4aa51},
intrahash = {c69d68bc8b8d36e551a24aa08bb4ce82},
issn = {1460-2059},
journal = {Bioinformatics},
keywords = {cytoscape plugin},
month = mar,
number = 6,
pages = {891--892},
pmcid = {PMC3307106},
pmid = {22210867},
posted-at = {2012-03-30 10:31:31},
priority = {2},
publisher = {Oxford University Press},
timestamp = {2018-12-02T16:09:07.000+0100},
title = {{CytoSEED}: a Cytoscape plugin for viewing, manipulating and analyzing metabolic models created by the Model {SEED}},
url = {http://dx.doi.org/10.1093/bioinformatics/btr719},
volume = 28,
year = 2012
}