The Bio2RDF project uses a data integration approach based on semantic web rules to answer a broad question: What is known about the mouse and human genomes? Using its rdfizing services, a semantic mashup of 65 million triples was built from 30 public bioinformatics data providers: GO, NCBI, UniProt, KEGG, PDB and many others. The average link-rank (ALR) of a node is 4.7 which means that a usual topic is connected to 4.7 other topics by direct or reverse links within the warehouse. A knowledge map of the graph and descriptive statistics about its content are presented. A downloadable version of the Bio2RDF Atlas graph in N3 format is available at http://bio2rdf.org/download.
%0 Book Section
%1 Belleau2008a
%A Belleau, Francois
%A Tourigny, Nicole
%A Good, Benjamin
%A Morissette, Jean
%A Bairoch, Amos
%A Cohen-Boulakia, Sarah
%A Froidevaux, Christine
%B Data Integration in the Life Sciences
%C Berlin, Heidelberg
%D 2008
%E Bairoch, Amos
%E Cohen-Boulakia, Sarah
%E Froidevaux, Christine
%I Springer Berlin / Heidelberg
%K *cul bio2rdf bioinformatics cul oclcml semantic-web
%P 153--160
%R 10.1007/978-3-540-69828-9\_15
%T Bio2RDF: A Semantic Web Atlas of Post Genomic Knowledge about Human and Mouse Data Integration in the Life Sciences
%U http://dx.doi.org/10.1007/978-3-540-69828-9\_15
%V 5109
%X The Bio2RDF project uses a data integration approach based on semantic web rules to answer a broad question: What is known about the mouse and human genomes? Using its rdfizing services, a semantic mashup of 65 million triples was built from 30 public bioinformatics data providers: GO, NCBI, UniProt, KEGG, PDB and many others. The average link-rank (ALR) of a node is 4.7 which means that a usual topic is connected to 4.7 other topics by direct or reverse links within the warehouse. A knowledge map of the graph and descriptive statistics about its content are presented. A downloadable version of the Bio2RDF Atlas graph in N3 format is available at http://bio2rdf.org/download.
%& 15
%@ 978-3-540-69827-2
@incollection{Belleau2008a,
abstract = {{The Bio2RDF project uses a data integration approach based on semantic web rules to answer a broad question: What is known about the mouse and human genomes? Using its rdfizing services, a semantic mashup of 65 million triples was built from 30 public bioinformatics data providers: GO, NCBI, UniProt, KEGG, PDB and many others. The average link-rank (ALR) of a node is 4.7 which means that a usual topic is connected to 4.7 other topics by direct or reverse links within the warehouse. A knowledge map of the graph and descriptive statistics about its content are presented. A downloadable version of the Bio2RDF Atlas graph in N3 format is available at http://bio2rdf.org/download.}},
added-at = {2019-03-11T21:00:05.000+0100},
address = {Berlin, Heidelberg},
author = {Belleau, Fran\c{c}ois and Tourigny, Nicole and Good, Benjamin and Morissette, Jean and Bairoch, Amos and Cohen-Boulakia, Sarah and Froidevaux, Christine},
biburl = {https://www.bibsonomy.org/bibtex/2b5750c167cdc9b4b875acd02700015fe/fairybasslet},
booktitle = {Data Integration in the Life Sciences},
chapter = 15,
citeulike-article-id = {7814383},
citeulike-linkout-0 = {http://portal.acm.org/citation.cfm?id=1427309},
citeulike-linkout-1 = {http://dx.doi.org/10.1007/978-3-540-69828-9\_15},
citeulike-linkout-2 = {http://www.springerlink.com/content/w611j82w7v4672r3},
comment = {978-3-540-69827-2},
doi = {10.1007/978-3-540-69828-9\_15},
editor = {Bairoch, Amos and Cohen-Boulakia, Sarah and Froidevaux, Christine},
interhash = {546d118ac9eb111959d0057a058d29bf},
intrahash = {b5750c167cdc9b4b875acd02700015fe},
isbn = {978-3-540-69827-2},
issn = {0302-9743},
keywords = {*cul bio2rdf bioinformatics cul oclcml semantic-web},
location = {Berlin, Heidelberg},
pages = {153--160},
posted-at = {2011-12-03 09:19:35},
priority = {2},
publisher = {Springer Berlin / Heidelberg},
series = {Lecture Notes in Computer Science},
timestamp = {2019-03-11T21:06:37.000+0100},
title = {{Bio2RDF: A Semantic Web Atlas of Post Genomic Knowledge about Human and Mouse Data Integration in the Life Sciences}},
url = {http://dx.doi.org/10.1007/978-3-540-69828-9\_15},
volume = 5109,
year = 2008
}