This paper presents a new method for deformable model-based segmentation
of lumen and thrombus in abdominal aortic aneurysms from computed
tomography (CT) angiography (CTA) scans. First the lumen is segmented
based on two positions indicated by the user, and subsequently the
resulting surface is used to initialize the automated thrombus segmentation
method. For the lumen, the image-derived deformation term is based
on a simple grey level model (two thresholds). For the more complex
problem of thrombus segmentation, a grey level modeling approach
with a nonparametric pattern classification technique lis used, namely
k-nearest neighbors. The intensity profile sampled along the surface
normal is used as classification feature. Manual segmentations are
used for training the classifier: samples are collected inside, outside,
and at the given boundary positions. The deformation is steered by
the most likely class corresponding to the intensity profile at each
vertex on the surface. A parameter optimization study is conducted,
followed by experiments to assess the overall segmentation quality
and the robustness of results against variation in user input. Results
obtained in a study of 17 patients show that the agreement with respect
to manual segmentations is comparable to previous values reported
in the literature, with considerable less user interaction.
%0 Journal Article
%1 Olabarriaga2005
%A Olabarriaga, SD
%A Rouet, JM
%A Fradkin, M
%A Breeuwer, M
%A Niessen, WJ
%C 445 HOES LANE, PISCATAWAY, NJ 08855 USA
%D 2005
%I IEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC
%J IEEE Transactions On Medical Imaging
%K aneurysm; aortic deformable grey image level modeling; models; segmentation; segmentation} statistical thrombus {abdominal
%N 4
%P 477-485
%T Segmentation of thrombus in abdominal aortic aneurysms from CTA
with nonparametric statistical grey level appearance modeling
%V 24
%X This paper presents a new method for deformable model-based segmentation
of lumen and thrombus in abdominal aortic aneurysms from computed
tomography (CT) angiography (CTA) scans. First the lumen is segmented
based on two positions indicated by the user, and subsequently the
resulting surface is used to initialize the automated thrombus segmentation
method. For the lumen, the image-derived deformation term is based
on a simple grey level model (two thresholds). For the more complex
problem of thrombus segmentation, a grey level modeling approach
with a nonparametric pattern classification technique lis used, namely
k-nearest neighbors. The intensity profile sampled along the surface
normal is used as classification feature. Manual segmentations are
used for training the classifier: samples are collected inside, outside,
and at the given boundary positions. The deformation is steered by
the most likely class corresponding to the intensity profile at each
vertex on the surface. A parameter optimization study is conducted,
followed by experiments to assess the overall segmentation quality
and the robustness of results against variation in user input. Results
obtained in a study of 17 patients show that the agreement with respect
to manual segmentations is comparable to previous values reported
in the literature, with considerable less user interaction.
@article{Olabarriaga2005,
abstract = {{This paper presents a new method for deformable model-based segmentation
of lumen and thrombus in abdominal aortic aneurysms from computed
tomography (CT) angiography (CTA) scans. First the lumen is segmented
based on two positions indicated by the user, and subsequently the
resulting surface is used to initialize the automated thrombus segmentation
method. For the lumen, the image-derived deformation term is based
on a simple grey level model (two thresholds). For the more complex
problem of thrombus segmentation, a grey level modeling approach
with a nonparametric pattern classification technique lis used, namely
k-nearest neighbors. The intensity profile sampled along the surface
normal is used as classification feature. Manual segmentations are
used for training the classifier: samples are collected inside, outside,
and at the given boundary positions. The deformation is steered by
the most likely class corresponding to the intensity profile at each
vertex on the surface. A parameter optimization study is conducted,
followed by experiments to assess the overall segmentation quality
and the robustness of results against variation in user input. Results
obtained in a study of 17 patients show that the agreement with respect
to manual segmentations is comparable to previous values reported
in the literature, with considerable less user interaction.}},
added-at = {2011-03-11T12:21:24.000+0100},
address = {{445 HOES LANE, PISCATAWAY, NJ 08855 USA}},
affiliation = {{Olabarriaga, SD (Reprint Author), Univ Utrecht, Med Ctr, Image Sci
Inst, QS 459,Heidelberglaan 100, NL-3584 CX Utrecht, Netherlands.
Univ Utrecht, Med Ctr, Image Sci Inst, NL-3584 CX Utrecht, Netherlands.
PMS Res Paris, F-92156 Suresnes, France. PMS, Med IT Adv Dev, NL-5680
DA Best, Netherlands.}},
author = {Olabarriaga, SD and Rouet, JM and Fradkin, M and Breeuwer, M and Niessen, WJ},
author-email = {{silvia@isi.uu.nl}},
biburl = {https://www.bibsonomy.org/bibtex/23a3fdf45f2835fc95db4e6782025e8eb/jmaiora},
doc-delivery-number = {{912BD}},
interhash = {6cf1e5733bfb008992756367efd5737e},
intrahash = {3a3fdf45f2835fc95db4e6782025e8eb},
issn = {{0278-0062}},
journal = {{IEEE Transactions On Medical Imaging}},
journal-iso = {{IEEE Trans. Med. Imaging}},
keywords = {aneurysm; aortic deformable grey image level modeling; models; segmentation; segmentation} statistical thrombus {abdominal},
keywords-plus = {{ACTIVE SHAPE MODELS; MEDICAL IMAGES; RECONSTRUCTION; REPAIR; DIAMETER}},
language = {{English}},
month = {{APR}},
number = {{4}},
number-of-cited-references = {{28}},
owner = {Josu},
pages = {{477-485}},
publisher = {{IEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC}},
subject-category = {{Computer Science, Interdisciplinary Applications; Engineering, Biomedical;
Engineering, Electrical \& Electronic; Imaging Science \& Photographic
Technology; Radiology, Nuclear Medicine \& Medical Imaging}},
times-cited = {{18}},
timestamp = {2011-03-11T12:21:27.000+0100},
title = {{Segmentation of thrombus in abdominal aortic aneurysms from CTA
with nonparametric statistical grey level appearance modeling}},
type = {{Article}},
unique-id = {{ISI:000228051200007}},
volume = {{24}},
year = {{2005}}
}